BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D10LP1|AL425121
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1436 0.0
>3x_Contig1619
Length = 7770
Score = 1436 bits (715), Expect = 0.0
Identities = 779/806 (96%), Gaps = 5/806 (0%)
Strand = Plus / Plus
Query: 1 attagaattatgtaataaattaaatgaagaattaaatactaattcttcaaaccatactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1869 attagaattatgtaataaattaaatgaagaattaaatactaattcttcaaaccatactcc 1928
Query: 61 cccccgcbcggcatcgccctaccgtagg-tagggcgagnccgcgcggg-aatatgatgat 118
||||||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 1929 cccccgcgcggcatcgccctaccgtagggtagggcgag-ccgcgcggggaatatgatgat 1987
Query: 119 attatttctaaaattaatattgaatatattgtaggatttatcgaagctgaaggtcattta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 attatttctaaaattaatattgaatatattgtaggatttatcgaagctgaaggtcattta 2047
Query: 179 gctatttctaaaaatataaacaataactataanntnagtttagaagtatctcaacatata 238
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 2048 gctatttctaaaaatataaacaataactataaaataagtttagaagtatctcaacatata 2107
Query: 239 aattcacccgcggctcctcccttcggggggagaccgcggggaagatttaatgaaggctat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2108 aattcacccgcggctcctcccttcggggggagaccgcggggaagatttaatgaaggctat 2167
Query: 299 tcaagatactatttthaattgaactcctgataatagtttattatatgatttacctaaatc 358
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2168 tcaagatactattttaaattgaactcctgataatagtttattatatgatttacctaaatc 2227
Query: 359 tactaataaaatttatwanccccgcggctcctcccctggtaatccctttaanggggagga 418
|||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2228 tactaataaaatttataaaccccgcggctcctcccctggtaatccctttaaaggggagga 2287
Query: 419 gtccgcggggaagatagtaatahatatagattttaaatttctagtactgatagattatat 478
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2288 gtccgcggggaagatagtaataaatatagattttaaatttctagtactgatagattatat 2347
Query: 479 tatcaagtatttccaactatgttaaatagtggattatatactagaaaatatattgatttt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 tatcaagtatttccaactatgttaaatagtggattatatactagaaaatatattgatttt 2407
Query: 539 gtaatgtgattttctagtattatcattathaaacatggtttacataamacattagagggt 598
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 2408 gtaatgtgattttctagtattatcattataaaacatggtttacataaaacattagagggt 2467
Query: 599 caattattattagccccccgcsgctcacccaaccmtagggttgggtgatgcmgcgggggg 658
||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||
Sbjct: 2468 caattattattagccccccgcggctcacccaaccctagggttgggtgatgccgcgggggg 2527
Query: 659 aagataaatttwkatytttycccgcggact-cccccgaagag-ggagccgcggggtgtat 716
||||||||||| || ||| |||||||||| ||||||||| | |||||||||||||||||
Sbjct: 2528 aagataaatttagatctttccccgcggactccccccgaagggaggagccgcggggtgtat 2587
Query: 717 taaytctaatagwtattttcaaaagaatgaattagtaccattagattttattttagaagt 776
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2588 taattctaatagatattttcaaaagaatgaattagtaccattagattttattttagaagt 2647
Query: 777 attatctatgaaacmaatttatgatc 802
|||||||||||||| |||||||||||
Sbjct: 2648 attatctatgaaaccaatttatgatc 2673
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5787
Number of Sequences: 1807
Number of extensions: 5787
Number of successful extensions: 196
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)